Research output per year
Research output per year
Personal profile
Research interests
Computational Oncology & Cancer Genomics
Medical Informatics, Machine Learning, and Artificial Intelligence
Molecular Evolution, Tumor Evolution, and Evolved Drug-Resistance
High-throughput Functional genomics
Metastatic Breast Cancer (MBC)
Expertise related to UN Sustainable Development Goals
In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. This person’s work contributes towards the following SDG(s):
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- 1 Similar Profiles
Collaborations and top research areas from the last five years
Recent external collaboration on country/territory level. Dive into details by clicking on the dots or
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A multi-modal single-cell and spatial expression map of metastatic breast cancer biopsies across clinicopathological features
Klughammer, J., Abravanel, D. L., Segerstolpe, Å., Blosser, T. R., Goltsev, Y., Cui, Y., Goodwin, D. R., Sinha, A., Ashenberg, O., Slyper, M., Vigneau, S., Jané‐Valbuena, J., Alon, S., Caraccio, C., Chen, J., Cohen, O., Cullen, N., DelloStritto, L. K., Dionne, D. & Files, J. & 39 others, , 1 Nov 2024, In: Nature Medicine. 30, 11, p. 3236-3249 14 p.Research output: Contribution to journal › Article › peer-review
Open Access -
Correction to: Subclonal cooperation drives metastasis by modulating local and systemic immune microenvironments (Nature Cell Biology, (2019), 21, 7, (879-888), 10.1038/s41556-019-0346-x)
Janiszewska, M., Tabassum, D. P., Castaño, Z., Cristea, S., Yamamoto, K. N., Kingston, N. L., Murphy, K. C., Shu, S., Harper, N. W., Del Alcazar, C. G., Alečković, M., Ekram, M. B., Cohen, O., Kwak, M., Qin, Y., Laszewski, T., Luoma, A., Marusyk, A., Wucherpfennig, K. W. & Wagle, N. & 4 others, , 1 May 2024, In: Nature Cell Biology. 26, 5, p. 841 1 p.Research output: Contribution to journal › Comment/debate
Open Access -
Elucidating the Transcriptional States of Spermatogenesis—Joint Analysis of Germline and Supporting Cell, Mice and Human, Normal and Perturbed, Bulk and Single-Cell RNA-Seq
AbuMadighem, A., Cohen, O. & Huleihel, M., 1 Jul 2024, In: Biomolecules. 14, 7, 840.Research output: Contribution to journal › Review article › peer-review
Open Access -
PD1 ligand functionality a biomarker of response to anti PD1 treatment in patients with HNSCC
Kaufman, B., Taha, T., Abramov, O., Zohar, Y., Mhameed, K., Cohen, O., Porgador, A., Elkabets, M. & Billan, S., 1 Dec 2024, In: npj Precision Oncology. 8, 1, 126.Research output: Contribution to journal › Article › peer-review
Open Access -
Functional binding of PD1 ligands predicts response to anti-PD1 treatment in patients with cancer
Kaufman, B., Abramov, O., Ievko, A., Apple, D., Shlapobersky, M., Allon, I., Greenshpan, Y., Bhattachrya, B., Cohen, O., Charkovsky, T., Gayster, A., Shaco-Levy, R., Rouvinov, K., Livoff, A., Elkabets, M. & Porgador, A., 26 May 2023, In: Science advances. 9, 21, eadg2809.Research output: Contribution to journal › Article › peer-review
Open Access2 Scopus citations -
High FOXA1 levels induce ER transcriptional reprogramming, a pro-metastatic secretome, and metastasis in endocrine-resistant breast cancer
Fu, X., Pereira, R., Liu, C. C., De Angelis, C., Shea, M. J., Nanda, S., Qin, L., Mitchell, T., Cataldo, M. L., Veeraraghavan, J., Sethunath, V., Giuliano, M., Gutierrez, C., Győrffy, B., Trivedi, M. V., Cohen, O., Wagle, N., Nardone, A., Jeselsohn, R. & Rimawi, M. F. & 2 others, , 29 Aug 2023, In: Cell Reports. 42, 8, 112821.Research output: Contribution to journal › Article › peer-review
Open Access5 Scopus citations -
Mutated HRAS Activates YAP1–AXL Signaling to Drive Metastasis of Head and Neck Cancer
Jagadeeshan, S., Prasad, M., Badarni, M., Ben-Lulu, T., Liju, V. B., Mathukkada, S., Saunders, C., Shnerb, A. B., Zorea, J., Yegodayev, K. M., Wainer, M., Vtorov, L., Allon, I., Cohen, O., Gausdal, G., Friedmann-Morvinski, D., Cheong, S. C., Ho, A. L., Rosenberg, A. J. & Kessler, L. & 5 others, , 1 Apr 2023, In: Cancer Research. 83, 7, p. 1031-1047 17 p.Research output: Contribution to journal › Article › peer-review
Open Access13 Scopus citations -
ESR1 mutant breast cancers show elevated basal cytokeratins and immune activation
Li, Z., McGinn, O., Wu, Y., Bahreini, A., Priedigkeit, N. M., Ding, K., Onkar, S., Lampenfeld, C., Sartorius, C. A., Miller, L., Rosenzweig, M., Cohen, O., Wagle, N., Richer, J. K., Muller, W. J., Buluwela, L., Ali, S., Bruno, T. C., Vignali, D. A. A. & Fang, Y. & 6 others, , 1 Dec 2022, In: Nature Communications. 13, 1, 2011.Research output: Contribution to journal › Article › peer-review
Open Access38 Scopus citations -
MITI minimum information guidelines for highly multiplexed tissue images
Human Tumor Atlas Network, 1 Mar 2022, In: Nature Methods. 19, 3, p. 262-267 6 p.Research output: Contribution to journal › Comment/debate
Open Access34 Scopus citations -
Opposing immune and genetic mechanisms shape oncogenic programs in synovial sarcoma
Jerby-Arnon, L., Neftel, C., Shore, M. E., Weisman, H. R., Mathewson, N. D., McBride, M. J., Haas, B., Izar, B., Volorio, A., Boulay, G., Cironi, L., Richman, A. R., Broye, L. C., Gurski, J. M., Luo, C. C., Mylvaganam, R., Nguyen, L., Mei, S., Melms, J. C. & Georgescu, C. & 30 others, , 1 Feb 2021, In: Nature Medicine. 27, 2, p. 289-300 12 p.Research output: Contribution to journal › Article › peer-review
71 Scopus citations
Projects
- 1 Finished
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Uncovering potential modulation of age-related transcriptional states in tumors and their microenvironment in clinical metastatic breast cancer
Berthelote, A. R. (PI), Cohen, O. (PI) & Polyak, K. (CoPI)
United States-Israel Binational Science Foundation (BSF)
1/09/20 → 31/08/24
Project: Research