番茄抗旱性的全基因组关联分析

Shuchao Dong; Jun Hong; Jiayi Ling; Zixin Xie; Shengjun Zhang; Liping Zhao; Liuxia Song; Yinlei Wang; Tongmin Zhao

doi:10.16420/j.issn.0513-353x.2023-0694

番茄抗旱性的全基因组关联分析

Translated title of the contribution: Genome-wide Association Studies of Drought Tolerance in Tomato

Shuchao Dong, Jun Hong, Jiayi Ling, Zixin Xie, Shengjun Zhang, Liping Zhao, Liuxia Song, Yinlei Wang, Tongmin Zhao

Research output: Contribution to journal › Article › peer-review

1 Scopus citations

Abstract

To conduct genome-wide association studies(GWAS)of drought tolerance,the relative water loss of detached leaves was analyzed after 24 h dehydration in 301 tomato(Solanum lycopersicum L.)accessions. A total number of three SNP sites(S02.1158758,S02.1160893,and S05.1426646)significantly associated with the drought tolerance of tomato accessions were identified by GWAS. Each single locus could explain 4.08%–18.97% of the phenotypic variation. Taken together,three SNP sites and seven candidate genes significantly associated with drought tolerance in tomato were identified in this study,which will help unravel the genetic and regulatory mechanisms of tomato drought tolerance,as well as establish a foundation for the genetic improvement of tomato stress tolerance.

Translated title of the contribution	Genome-wide Association Studies of Drought Tolerance in Tomato
Original language	Chinese
Pages (from-to)	229-238
Number of pages	10
Journal	Acta Horticulturae Sinica
Volume	51
Issue number	2
DOIs	https://doi.org/10.16420/j.issn.0513-353x.2023-0694
State	Published - 1 Jan 2024
Externally published	Yes

Keywords

candidate gene
drought tolerance
genome-wide association studies
tomato

ASJC Scopus subject areas

Plant Science
Horticulture

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title = "番茄抗旱性的全基因组关联分析",

abstract = "To conduct genome-wide association studies(GWAS)of drought tolerance,the relative water loss of detached leaves was analyzed after 24 h dehydration in 301 tomato(Solanum lycopersicum L.)accessions. A total number of three SNP sites(S02.1158758,S02.1160893,and S05.1426646)significantly associated with the drought tolerance of tomato accessions were identified by GWAS. Each single locus could explain 4.08%–18.97% of the phenotypic variation. Taken together,three SNP sites and seven candidate genes significantly associated with drought tolerance in tomato were identified in this study,which will help unravel the genetic and regulatory mechanisms of tomato drought tolerance,as well as establish a foundation for the genetic improvement of tomato stress tolerance.",

keywords = "candidate gene, drought tolerance, genome-wide association studies, tomato",

author = "Shuchao Dong and Jun Hong and Jiayi Ling and Zixin Xie and Shengjun Zhang and Liping Zhao and Liuxia Song and Yinlei Wang and Tongmin Zhao",

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T1 - 番茄抗旱性的全基因组关联分析

AU - Dong, Shuchao

AU - Hong, Jun

AU - Ling, Jiayi

AU - Xie, Zixin

AU - Zhang, Shengjun

AU - Zhao, Liping

AU - Song, Liuxia

AU - Wang, Yinlei

AU - Zhao, Tongmin

PY - 2024/1/1

Y1 - 2024/1/1

N2 - To conduct genome-wide association studies(GWAS)of drought tolerance,the relative water loss of detached leaves was analyzed after 24 h dehydration in 301 tomato(Solanum lycopersicum L.)accessions. A total number of three SNP sites(S02.1158758,S02.1160893,and S05.1426646)significantly associated with the drought tolerance of tomato accessions were identified by GWAS. Each single locus could explain 4.08%–18.97% of the phenotypic variation. Taken together,three SNP sites and seven candidate genes significantly associated with drought tolerance in tomato were identified in this study,which will help unravel the genetic and regulatory mechanisms of tomato drought tolerance,as well as establish a foundation for the genetic improvement of tomato stress tolerance.

AB - To conduct genome-wide association studies(GWAS)of drought tolerance,the relative water loss of detached leaves was analyzed after 24 h dehydration in 301 tomato(Solanum lycopersicum L.)accessions. A total number of three SNP sites(S02.1158758,S02.1160893,and S05.1426646)significantly associated with the drought tolerance of tomato accessions were identified by GWAS. Each single locus could explain 4.08%–18.97% of the phenotypic variation. Taken together,three SNP sites and seven candidate genes significantly associated with drought tolerance in tomato were identified in this study,which will help unravel the genetic and regulatory mechanisms of tomato drought tolerance,as well as establish a foundation for the genetic improvement of tomato stress tolerance.

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KW - drought tolerance

KW - genome-wide association studies

KW - tomato

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JO - Acta Horticulturae Sinica

JF - Acta Horticulturae Sinica

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ER -

番茄抗旱性的全基因组关联分析

Abstract

Keywords

ASJC Scopus subject areas

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