Antigen experienced T cells from peripheral blood recognize p53 neoantigens

Parisa Malekzadeh, Rami Yossef, Gal Cafri, Biman C. Paria, Frank J. Lowery, Mohammad Jafferji, Meghan L. Good, Abraham Sachs, Amy R. Copeland, Sanghyun P. Kim, Scott Kivitz, Maria R. Parkhurst, Paul F. Robbins, Satyajit Ray, Liqiang Xi, Mark Raffeld, Zhiya Yu, Nicholas P. Restifo, Robert P.T. Somerville, Steven A. RosenbergDrew C. Deniger

Research output: Contribution to journalArticlepeer-review

85 Scopus citations

Abstract

Purpose: The purpose of this study was to evaluate antigen experienced T cells in peripheral blood lymphocytes (PBL) for responses to p53 neoantigens. Experimental Design: PBLs from patients with a mutated TP53 tumor were sorted for antigen-experienced T cells and in vitro stimulation (IVS) was performed with p53 neoantigens. The IVS cultures were stimulated with antigen-presenting cells expressing p53 neoantigens, enriched for 41BB/OX40 and grown with rapid expansion protocol. Results: T-cell responses were not observed in the PBLs of 4 patients who did not have tumor-infiltrating lymphocyte (TIL) responses to mutated TP53. In contrast, 5 patients with TIL responses to mutated TP53 also had similar T-cell responses in their PBLs, indicating that the PBLs and TILs were congruent in p53 neoantigen reactivity. CD4þ and CD8þ T cells were specific for p53R175H, p53Y220C, or p53R248W neoantigens, including a 78% reactive T-cell culture against p53R175H and HLA-A*02:01. Tracking TCRB clonotypes (clonality, top ranked, and TP53 mutation-specific) supported the enrichment of p53 neoantigen-reactive T cells from PBLs. The same T-cell receptor (TCR) from the TIL was found in the IVS cultures in three cases and multiple unique TCRs were found in another patient. TP53 mutation-specific T cells also recognized tumor cell lines bearing the appropriate human leukocyte antigen restriction element and TP53 mutation, indicating these T cells could recognize processed and presented p53 neoantigens. Conclusions: PBL was a noninvasive source of T cells targeting TP53 mutations for cell therapy and can provide a window into intratumoral p53 neoantigen immune responses.

Original languageEnglish
Pages (from-to)1267-1276
Number of pages10
JournalClinical Cancer Research
Volume26
Issue number6
DOIs
StatePublished - 15 Mar 2020
Externally publishedYes

ASJC Scopus subject areas

  • General Medicine

Fingerprint

Dive into the research topics of 'Antigen experienced T cells from peripheral blood recognize p53 neoantigens'. Together they form a unique fingerprint.

Cite this