TY - GEN
T1 - Coding for Optimized Writing Rate in DNA Storage
AU - Jain, Siddharth
AU - Farnoud, Farzad
AU - Schwartz, Moshe
AU - Bruck, Jehoshua
N1 - Publisher Copyright:
© 2020 IEEE.
PY - 2020/6/1
Y1 - 2020/6/1
N2 - A method for encoding information in DNA sequences is described. The method is based on the precisionresolution framework, and is aimed to work in conjunction with a recently suggested terminator-free template independent DNA synthesis method. The suggested method optimizes the amount of information bits per synthesis time unit, namely, the writing rate. Additionally, the encoding scheme studied here takes into account the existence of multiple copies of the DNA sequence, which are independently distorted. Finally, quantizers for various run-length distributions are designed.
AB - A method for encoding information in DNA sequences is described. The method is based on the precisionresolution framework, and is aimed to work in conjunction with a recently suggested terminator-free template independent DNA synthesis method. The suggested method optimizes the amount of information bits per synthesis time unit, namely, the writing rate. Additionally, the encoding scheme studied here takes into account the existence of multiple copies of the DNA sequence, which are independently distorted. Finally, quantizers for various run-length distributions are designed.
UR - http://www.scopus.com/inward/record.url?scp=85090404678&partnerID=8YFLogxK
U2 - 10.1109/ISIT44484.2020.9174253
DO - 10.1109/ISIT44484.2020.9174253
M3 - Conference contribution
AN - SCOPUS:85090404678
T3 - IEEE International Symposium on Information Theory - Proceedings
SP - 711
EP - 716
BT - 2020 IEEE International Symposium on Information Theory, ISIT 2020 - Proceedings
PB - Institute of Electrical and Electronics Engineers
T2 - 2020 IEEE International Symposium on Information Theory, ISIT 2020
Y2 - 21 July 2020 through 26 July 2020
ER -