TY - JOUR
T1 - Collective dynamics of two-dimensional swimming bacteria
T2 - Experiments and models
AU - Ariel, Gil
AU - Sidortsov, Marina
AU - Ryan, Shawn D.
AU - Heidenreich, Sebastian
AU - Bär, Markus
AU - Be'Er, Avraham
N1 - Publisher Copyright:
© 2018 American Physical Society.
PY - 2018/9/24
Y1 - 2018/9/24
N2 - The physical properties of collectively swimming bacteria have been thoroughly investigated both experimentally and theoretically using simulations. While models successfully predict some aspects of the dynamics observed in experiments, both models and experiments vary in their underlying assumptions and physical conditions. Hence, it is not clear which models are appropriate for which experimental setups. Here, we study, both experimentally and using two types of models (agent-based and continuous), the statistics of two strains of Serratia marcescens, wild-type and a nontumbling strain, swimming on a two-dimensional monolayer at varying concentrations. The experimental setup allows for a direct comparison with simulation results. Both models capture some aspects of the dynamics but fail at displaying others, especially at high densities. In particular, the effect of tumbling is much more significant than mere rotational (angular) diffusion.
AB - The physical properties of collectively swimming bacteria have been thoroughly investigated both experimentally and theoretically using simulations. While models successfully predict some aspects of the dynamics observed in experiments, both models and experiments vary in their underlying assumptions and physical conditions. Hence, it is not clear which models are appropriate for which experimental setups. Here, we study, both experimentally and using two types of models (agent-based and continuous), the statistics of two strains of Serratia marcescens, wild-type and a nontumbling strain, swimming on a two-dimensional monolayer at varying concentrations. The experimental setup allows for a direct comparison with simulation results. Both models capture some aspects of the dynamics but fail at displaying others, especially at high densities. In particular, the effect of tumbling is much more significant than mere rotational (angular) diffusion.
UR - http://www.scopus.com/inward/record.url?scp=85053939012&partnerID=8YFLogxK
U2 - 10.1103/PhysRevE.98.032415
DO - 10.1103/PhysRevE.98.032415
M3 - Article
AN - SCOPUS:85053939012
SN - 2470-0045
VL - 98
JO - Physical Review E
JF - Physical Review E
IS - 3
M1 - 032415
ER -