GPU-Based real-time processing of 3-d refractive index maps of biological cells from tomographic phase microscopy

Gili Dardikman; Mor Habaza; Laura Waller; Natan T. Shaked

doi:10.1364/COSI.2016.CT4C.2

GPU-Based real-time processing of 3-d refractive index maps of biological cells from tomographic phase microscopy

Gili Dardikman, Mor Habaza, Laura Waller, Natan T. Shaked

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

Abstract

We review our highly parallel algorithm for real-time reconstruction of quantitative 3-D refractive-index maps of biological cells without labeling, obtained from interferometric tomographic phase microscopy using the computer graphic processing unit (GPU) and CUDA programming.

Original language	English
Title of host publication	Computational Optical Sensing and Imaging, COSI 2016
Publisher	Optica Publishing Group (formerly OSA)
ISBN (Print)	9781943580156
DOIs	https://doi.org/10.1364/COSI.2016.CT4C.2
State	Published - 18 Jul 2016
Externally published	Yes
Event	Computational Optical Sensing and Imaging, COSI 2016 - Heidelberg, Germany Duration: 25 Jul 2016 → 28 Jul 2016

Publication series

Name	Optics InfoBase Conference Papers
ISSN (Electronic)	2162-2701

Conference

Conference	Computational Optical Sensing and Imaging, COSI 2016
Country/Territory	Germany
City	Heidelberg
Period	25/07/16 → 28/07/16

ASJC Scopus subject areas

Electronic, Optical and Magnetic Materials
Mechanics of Materials

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10.1364/COSI.2016.CT4C.2

Cite this

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title = "GPU-Based real-time processing of 3-d refractive index maps of biological cells from tomographic phase microscopy",

abstract = "We review our highly parallel algorithm for real-time reconstruction of quantitative 3-D refractive-index maps of biological cells without labeling, obtained from interferometric tomographic phase microscopy using the computer graphic processing unit (GPU) and CUDA programming.",

author = "Gili Dardikman and Mor Habaza and Laura Waller and Shaked, {Natan T.}",

note = "Publisher Copyright: {\textcopyright} OSA 2016.; Computational Optical Sensing and Imaging, COSI 2016 ; Conference date: 25-07-2016 Through 28-07-2016",

year = "2016",

month = jul,

day = "18",

doi = "10.1364/COSI.2016.CT4C.2",

language = "English",

isbn = "9781943580156",

series = "Optics InfoBase Conference Papers",

publisher = "Optica Publishing Group (formerly OSA)",

booktitle = "Computational Optical Sensing and Imaging, COSI 2016",

}

Dardikman, G, Habaza, M, Waller, L & Shaked, NT 2016, GPU-Based real-time processing of 3-d refractive index maps of biological cells from tomographic phase microscopy. in Computational Optical Sensing and Imaging, COSI 2016. Optics InfoBase Conference Papers, Optica Publishing Group (formerly OSA), Computational Optical Sensing and Imaging, COSI 2016, Heidelberg, Germany, 25/07/16. https://doi.org/10.1364/COSI.2016.CT4C.2

GPU-Based real-time processing of 3-d refractive index maps of biological cells from tomographic phase microscopy. / Dardikman, Gili; Habaza, Mor; Waller, Laura et al.
Computational Optical Sensing and Imaging, COSI 2016. Optica Publishing Group (formerly OSA), 2016. (Optics InfoBase Conference Papers).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

TY - GEN

T1 - GPU-Based real-time processing of 3-d refractive index maps of biological cells from tomographic phase microscopy

AU - Dardikman, Gili

AU - Habaza, Mor

AU - Waller, Laura

AU - Shaked, Natan T.

PY - 2016/7/18

Y1 - 2016/7/18

N2 - We review our highly parallel algorithm for real-time reconstruction of quantitative 3-D refractive-index maps of biological cells without labeling, obtained from interferometric tomographic phase microscopy using the computer graphic processing unit (GPU) and CUDA programming.

AB - We review our highly parallel algorithm for real-time reconstruction of quantitative 3-D refractive-index maps of biological cells without labeling, obtained from interferometric tomographic phase microscopy using the computer graphic processing unit (GPU) and CUDA programming.

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U2 - 10.1364/COSI.2016.CT4C.2

DO - 10.1364/COSI.2016.CT4C.2

M3 - Conference contribution

AN - SCOPUS:85165743721

SN - 9781943580156

T3 - Optics InfoBase Conference Papers

BT - Computational Optical Sensing and Imaging, COSI 2016

PB - Optica Publishing Group (formerly OSA)

T2 - Computational Optical Sensing and Imaging, COSI 2016

Y2 - 25 July 2016 through 28 July 2016

ER -

GPU-Based real-time processing of 3-d refractive index maps of biological cells from tomographic phase microscopy

Abstract

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ASJC Scopus subject areas

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