RMExplorer: A Visual Analytics Approach to Explore the Performance and the Fairness of Disease Risk Models on Population Subgroups

  • Bum Chul Kwon
  • , Uri Kartoun
  • , Shaan Khurshid
  • , Mikhail Yurochkin
  • , Subha Maity
  • , Deanna G. Brockman
  • , Amit V. Khera
  • , Patrick T. Ellinor
  • , Steven A. Lubitz
  • , Kenney Ng

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

11 Scopus citations

Abstract

Disease risk models can identify high-risk patients and help clinicians provide more personalized care. However, risk models de-veloped on one dataset may not generalize across diverse subpop-ulations of patients in different datasets and may have unexpected performance. It is challenging for clinical researchers to inspect risk models across different subgroups without any tools. Therefore, we developed an interactive visualization system called RMExplorer (Risk Model Explorer) to enable interactive risk model assessment. Specifically, the system allows users to define subgroups of patients by selecting clinical, demographic, or other characteristics, to ex-plore the performance and fairness of risk models on the subgroups, and to understand the feature contributions to risk scores. To demonstrate the usefulness of the tool, we conduct a case study, where we use RMExplorer to explore three atrial fibrillation risk models by applying them to the UK Biobank dataset of 445,329 individuals. RMExplorer can help researchers to evaluate the performance and biases of risk models on subpopulations of interest in their data.

Original languageEnglish
Title of host publicationProceedings - 2022 IEEE Visualization Conference - Short Papers, VIS 2022
PublisherInstitute of Electrical and Electronics Engineers
Pages50-54
Number of pages5
ISBN (Electronic)9781665488129
DOIs
StatePublished - 1 Jan 2022
Externally publishedYes
Event2022 IEEE Visualization Conference, VIS 2022 - Virtual, Online, United States
Duration: 16 Oct 202221 Oct 2022

Publication series

NameProceedings - 2022 IEEE Visualization Conference - Short Papers, VIS 2022

Conference

Conference2022 IEEE Visualization Conference, VIS 2022
Country/TerritoryUnited States
CityVirtual, Online
Period16/10/2221/10/22

Keywords

  • Human-centered computing
  • Visualization
  • electronic health records
  • explainability
  • fairness
  • health informatics
  • interpretability
  • subgroup analysis
  • visual analytics

ASJC Scopus subject areas

  • Computer Graphics and Computer-Aided Design
  • Human-Computer Interaction
  • Media Technology

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