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SERS-based ssDNA composition analysis with inhomogeneous peak broadening and reservoir computing

  • Phuong H.L. Nguyen
  • , Shimon Rubin
  • , Pulak Sarangi
  • , Piya Pal
  • , Yeshaiahu Fainman

Research output: Contribution to journal › Article › peer-review

3 Scopus citations

Abstract

Surface-enhanced Raman spectroscopy employed in conjunction with post-processing machine learning methods is a promising technique for effective data analysis, allowing one to enhance the molecular and chemical composition analysis of information rich DNA molecules. In this work, we report on a room temperature inhomogeneous broadening as a function of the increased adenine concentration and employ this feature to develop one-dimensional and two dimensional chemical composition classification models of 200 long single stranded DNA sequences. Afterwards, we develop a reservoir computing chemical composition classification scheme of the same molecules and demonstrate enhanced performance that does not rely on manual feature identification.

Original languageEnglish
Article number023701
JournalApplied Physics Letters
Volume120
Issue number2
DOIs
StatePublished - 10 Jan 2022
Externally publishedYes

ASJC Scopus subject areas

  • Physics and Astronomy (miscellaneous)

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